Functions for Handling Sirius Databases

This set of functions provides tools for managing databases in Sirius. These include listing available databases, retrieving database information, deleting databases, and creating new databases from files.

List the databases that are searchable by Sirius for spectral matching.

Retrieve detailed information about a specific database.

Delete a database from Sirius.

Create a new database in Sirius from specified files.

Usage

listDbs(sirius)

infoDb(sirius, databaseId = character())

removeDb(sirius, databaseId = character(), delete = FALSE)

createDb(
  sirius,
  databaseId = character(),
  files = character(),
  location = getwd()
)

Arguments

sirius: A Sirius object representing the Sirius connection.
databaseId: A character(1) string specifying the new database ID.
delete: logical(1), whether to also delete the database file from disk. If FALSE (default) the database is only removed from Sirius and its file is kept.
files: A character vector of file paths to add to the database.
location: A character(1) string specifying the location for the database. Defaults to the current working directory.

Value

A data.frame containing details of searchable databases.

A list containing details of the specified database.

A logical(1) indicating whether the database was successfully removed.

A list containing details of the created database.