This repository provides a backend for Spectra objects that represents and retrieves mass spectrometry (MS) data directly from metabolomics experiments deposited at the public MetaboLights repository. Mass spectrometry data files of an experiment are downloaded and cached locally using the BiocFileCache package.
Installation
The package can be installed with
install.packages("BiocManager")
BiocManager::install("RforMassSpectrometry/MsBackendMetaboLights")Contributions
Contributions are highly welcome and should follow the contribution guidelines. Also, please check the coding style guidelines in the RforMassSpectrometry vignette.